Antigen

Antigen Class

TFs and others

Antigen

RXRA

Cell type

Cell type Class

Breast

Cell type

SUM 159PT

Primary Tissue

Breast

Tissue Diagnosis

Anaplastic Carcinoma

Sample

source_name

Mammary cells

tissue

breast

cell line

SUM159

cell type

Triple negative breast cancer cells

agent

Bexarotene

time

7 days

chip antibody

RXRa (Santa Cruz, sc-553)

Sequenced DNA Library

library_name

ERROR: cannot retrieve data from NCBI: too many requests

library_strategy

ERROR: cannot retrieve data from NCBI: too many requests

library_source

ERROR: cannot retrieve data from NCBI: too many requests

library_selection

ERROR: cannot retrieve data from NCBI: too many requests

library_construction_protocol

ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model

ERROR: cannot retrieve data from NCBI: too many requests

cycle_sequence

ERROR: cannot retrieve data from NCBI: too many requests

cycle_count

ERROR: cannot retrieve data from NCBI: too many requests

flow_sequence

ERROR: cannot retrieve data from NCBI: too many requests

flow_count

ERROR: cannot retrieve data from NCBI: too many requests

key_sequence

ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads

86769083

Reads aligned (%)

68.1

Duplicates removed (%)

20.1

Number of peaks

7505 (qval < 1E-05)

hg19

Number of total reads

86769083

Reads aligned (%)

67.5

Duplicates removed (%)

20.7

Number of peaks

6918 (qval < 1E-05)